Thursday, February 18, 2016

Enantiomers: Exactly the Same… Only, Different!



By Jim Schmidt
Senior Scientific Advisor
ABC Laboratories

In chemistry, enantiomers are stereoisomers that are non-superimposable mirror images of each other - much like your left and right hands are the same except for being reversed along one axis.

*Image courtesy of Wikimedia Commons


Indeed, the study of enantiomers – chirality – comes from the Greek word, “Χειρ = Cheir =  Hand”!

Enantiomers have identical chemical and physical properties except for their ability to rotate plane-polarized light by equal amounts but in opposite directions.

However, in biological systems, they can have very different behavior.  Some of the most interesting – and important – differences are in drug metabolism.

For the better part of a century, the consideration of enantiomers in drug metabolism was limited to academic study and/or to natural products, owing in no small part to the limits of separations chemistry.

However, for many reasons (including improvements in analytical chemistry), chirality has been earning ever-greater importance in drug discovery and development, such that many new drugs reaching the market in the first decades of the 21st century are single enantiomers, rather than the racemic mixtures (or achiral drugs) that dominated the latter half of the 20th century.

Indeed, in the recent report, “The Year in New Drugs” (C&E News, February 1, 2016, pp. 12-17), it can be seen that more than half of the newly-approved small-molecule drugs in 2015 had specific stereochemistry (and often with more than one chiral center).

Examples of enantio-selective biotransformations include:
  • Prochiral to Chiral 
  • Chiral to Chiral 
  • Chiral to Achiral 
  • Chiral to Diastereoisomer 
  • Chiral Inversion

These metabolism pathways can have significant effects on pharmacology and drug safety. While the movement towards single enantiomers as drug candidates, noted above, mitigates safety problems that might  be associated with racemic mixtures, they do not necessarily alleviate the need to consider and study achiral-to-chiral, chiral-to-chiral, and/or chiral-to-diastereomer transformations.

Adapted from my chapter – “Metabolite Profiling” – in New Horizons in Predictive Drug Metabolism and Pharmacokinetics (edited by Alan G. E. Wilson; Royal Society of Chemistry, 2015).

Tuesday, February 9, 2016

Challenges in the Characterization of Antibody Drug Conjugates


By Glenn Petrie, Ph.D.
Senior Scientific Advisor
ABC Laboratories
www.abclabs.com

Antibody Drug Conjugates (ADC) provide a unique new treatment for a variety of cancers. ADCs consist of a monoclonal antibody (mAb) targeted to the receptor of interest and linked to a highly cytotoxic payload. The mAb binds to the cell and enters the cytoplasm. Once inside the cell, the linker is cleaved and the toxin released. This provides the ability to use highly cytotoxic compounds without the serious side effects of systematic chemotherapy. It is estimated that there are 100-150 ADCs currently in preclinical development. ADCs present unique analytical challenges.

In addition to the complicated mAb, there is the added complexity of combining a cleavable linker and a cytotoxic drug. This introduces the necessity for determining drug loading, linkage sites and Drug Antibody Ratio (DAR). The critical technique for analysis on ADCs is ultra-high resolution QToF mass spectroscopy. This allows for determination of relative loading, DAR and linkage sites, as well as PTMs, disulfide linkages and related substances/degradants (deamidation/oxidation, truncations, and amino acid substitutions). Due to their high resolution, UHR-QTof instruments have the ability to sequence proteins up to 25-30 kDa. The specific protease IdeS (which cleaves just below the hinge region of IgG) under reducing conditions results in three polypeptide chains of ~ 25kDa: Fd region, Fc/2 region and the LC region. Analysis of these digests by UHR QTof MS yields complete sequencing of each polypeptide, DAR, payload and glycan distribution. If necessary, other proteases may be utilized for more detailed analysis. Additional characterization includes the following:

  • Intact mass
  • Deglycosylated mass
  • IEX
  • Imaging CIEF
  • CE-SDS
  • SEC
  • N-linked glycan analysis
  • HIC (secondary DAR analysis)
  • Binding assay
  • Bioassay
  • Higher Order Analysis (CD, AUC, DSC, etc.)

The FDA considers the mAb a drug substance so both the mAb and ADC must be fully characterized. In addition, the agency has been requesting characterization of charge variants of the mAb and ADC. This necessitates preparative IEX followed by characterization of the acidic and basic fractions. Based on all these considerations, characterization of ADCs require careful planning and attention to detail.

Thursday, February 4, 2016

Staying the Course (a Note to the Agribusiness Community)


By Jon Rhodes, M.S.
Senior Scientific Advisor
ABC Laboratories
www.abclabs.com

Times are tough for the agribusiness community.  The pace of mergers and acquisitions is heating up in a big way and continually challenging businesses to grow their pipelines and accelerate development timelines to remain competitive.  Falling commodity prices and high inventories, coupled with slowing product sales volumes and fluctuating currency exchange rates are affecting the bottom line.  The growth in the number of herbicide resistant weed species has kicked into high gear with the United States leading the way.  Global weather patterns are becoming more variable and the continued availability of adequate water resources for agricultural use is in doubt.  Pollinators and endangered species are under pressure.  Regulatory pressures are expanding.  Crop yield enhancement technology continues to face regulatory and social obstacles to global acceptance.  Is agribusiness destined to become mired in a long and protracted slow-growth environment as a result?

Not likely.  The challenge facing humanity and the agribusiness community has never been greater.  Feeding a world population estimated at more than 9 billion people by 2050 will require a 70 to 100 percent rise in overall food production.  Rising wealth in developing countries is bringing changing dietary preferences and greater demand for food.  The total amount of arable land is shrinking.  These factors and others will put enormous pressure on social stability and global security without a concerted and collaborative effort.  The opportunities and consequences are clear and no sector is more prepared to address the challenges we’re facing than the global agribusiness community with a proven record of  investment in technological innovation and enhancement of crop production practices.