Thursday, February 18, 2016

Enantiomers: Exactly the Same… Only, Different!



By Jim Schmidt
Senior Scientific Advisor
ABC Laboratories

In chemistry, enantiomers are stereoisomers that are non-superimposable mirror images of each other - much like your left and right hands are the same except for being reversed along one axis.

*Image courtesy of Wikimedia Commons


Indeed, the study of enantiomers – chirality – comes from the Greek word, “Χειρ = Cheir =  Hand”!

Enantiomers have identical chemical and physical properties except for their ability to rotate plane-polarized light by equal amounts but in opposite directions.

However, in biological systems, they can have very different behavior.  Some of the most interesting – and important – differences are in drug metabolism.

For the better part of a century, the consideration of enantiomers in drug metabolism was limited to academic study and/or to natural products, owing in no small part to the limits of separations chemistry.

However, for many reasons (including improvements in analytical chemistry), chirality has been earning ever-greater importance in drug discovery and development, such that many new drugs reaching the market in the first decades of the 21st century are single enantiomers, rather than the racemic mixtures (or achiral drugs) that dominated the latter half of the 20th century.

Indeed, in the recent report, “The Year in New Drugs” (C&E News, February 1, 2016, pp. 12-17), it can be seen that more than half of the newly-approved small-molecule drugs in 2015 had specific stereochemistry (and often with more than one chiral center).

Examples of enantio-selective biotransformations include:
  • Prochiral to Chiral 
  • Chiral to Chiral 
  • Chiral to Achiral 
  • Chiral to Diastereoisomer 
  • Chiral Inversion

These metabolism pathways can have significant effects on pharmacology and drug safety. While the movement towards single enantiomers as drug candidates, noted above, mitigates safety problems that might  be associated with racemic mixtures, they do not necessarily alleviate the need to consider and study achiral-to-chiral, chiral-to-chiral, and/or chiral-to-diastereomer transformations.

Adapted from my chapter – “Metabolite Profiling” – in New Horizons in Predictive Drug Metabolism and Pharmacokinetics (edited by Alan G. E. Wilson; Royal Society of Chemistry, 2015).

Tuesday, February 9, 2016

Challenges in the Characterization of Antibody Drug Conjugates


By Glenn Petrie, Ph.D.
Senior Scientific Advisor
ABC Laboratories
www.abclabs.com

Antibody Drug Conjugates (ADC) provide a unique new treatment for a variety of cancers. ADCs consist of a monoclonal antibody (mAb) targeted to the receptor of interest and linked to a highly cytotoxic payload. The mAb binds to the cell and enters the cytoplasm. Once inside the cell, the linker is cleaved and the toxin released. This provides the ability to use highly cytotoxic compounds without the serious side effects of systematic chemotherapy. It is estimated that there are 100-150 ADCs currently in preclinical development. ADCs present unique analytical challenges.

In addition to the complicated mAb, there is the added complexity of combining a cleavable linker and a cytotoxic drug. This introduces the necessity for determining drug loading, linkage sites and Drug Antibody Ratio (DAR). The critical technique for analysis on ADCs is ultra-high resolution QToF mass spectroscopy. This allows for determination of relative loading, DAR and linkage sites, as well as PTMs, disulfide linkages and related substances/degradants (deamidation/oxidation, truncations, and amino acid substitutions). Due to their high resolution, UHR-QTof instruments have the ability to sequence proteins up to 25-30 kDa. The specific protease IdeS (which cleaves just below the hinge region of IgG) under reducing conditions results in three polypeptide chains of ~ 25kDa: Fd region, Fc/2 region and the LC region. Analysis of these digests by UHR QTof MS yields complete sequencing of each polypeptide, DAR, payload and glycan distribution. If necessary, other proteases may be utilized for more detailed analysis. Additional characterization includes the following:

  • Intact mass
  • Deglycosylated mass
  • IEX
  • Imaging CIEF
  • CE-SDS
  • SEC
  • N-linked glycan analysis
  • HIC (secondary DAR analysis)
  • Binding assay
  • Bioassay
  • Higher Order Analysis (CD, AUC, DSC, etc.)

The FDA considers the mAb a drug substance so both the mAb and ADC must be fully characterized. In addition, the agency has been requesting characterization of charge variants of the mAb and ADC. This necessitates preparative IEX followed by characterization of the acidic and basic fractions. Based on all these considerations, characterization of ADCs require careful planning and attention to detail.

Thursday, February 4, 2016

Staying the Course (a Note to the Agribusiness Community)


By Jon Rhodes, M.S.
Senior Scientific Advisor
ABC Laboratories
www.abclabs.com

Times are tough for the agribusiness community.  The pace of mergers and acquisitions is heating up in a big way and continually challenging businesses to grow their pipelines and accelerate development timelines to remain competitive.  Falling commodity prices and high inventories, coupled with slowing product sales volumes and fluctuating currency exchange rates are affecting the bottom line.  The growth in the number of herbicide resistant weed species has kicked into high gear with the United States leading the way.  Global weather patterns are becoming more variable and the continued availability of adequate water resources for agricultural use is in doubt.  Pollinators and endangered species are under pressure.  Regulatory pressures are expanding.  Crop yield enhancement technology continues to face regulatory and social obstacles to global acceptance.  Is agribusiness destined to become mired in a long and protracted slow-growth environment as a result?

Not likely.  The challenge facing humanity and the agribusiness community has never been greater.  Feeding a world population estimated at more than 9 billion people by 2050 will require a 70 to 100 percent rise in overall food production.  Rising wealth in developing countries is bringing changing dietary preferences and greater demand for food.  The total amount of arable land is shrinking.  These factors and others will put enormous pressure on social stability and global security without a concerted and collaborative effort.  The opportunities and consequences are clear and no sector is more prepared to address the challenges we’re facing than the global agribusiness community with a proven record of  investment in technological innovation and enhancement of crop production practices.

Tuesday, January 12, 2016

Well Characterized Biopharmaceuticals Meeting - 2016

By Glenn Petrie, Ph.D.
Senior Scientific Advisor
ABC Laboratories
www.abclabs.com

The 20th annual Well Characterized Biopharmaceuticals (WBCP) meeting will take place in Washington, D.C. the week of January 24th. I attended the inaugural meeting and have only missed one in the last 20 years. This is always an excellent meeting covering both the scientific and regulatory aspects of biopharmaceutical development in equal measure. I am particularly excited about this year’s topics including Higher Order Structure, Combo Products, Biosimilars and Pre-clinical development. I am looking forward to seeing you at the ABC Labs booth to discuss some of our exciting studies. These include:
  • · Utilizing the WES system to quantitate both intact and degraded protein DP in fecal matter
  • · Supported two successful IND submissions for Antibody Drug Conjugates in 2015 with a third in progress. This included full characterization, method development, qualification, release and stability studies. These submissions had NO comments regarding the chemistry section of CMC.
  • · Supported our clients during difficult times
    • During a Phase II trial, reagent changes caused bioanalytical ELISA results to be “offset” from the previous results. We were able to troubleshoot and solve the client’s problem.
    • When a client suddenly severed a relationship with its CRO we were able to transfer, qualify and release methods in support of GMP DS and DP while meeting deadlines.
We hope to speak to you about your biopharmaceutical analytical needs during the breaks, as well as at the Exhibitor Reception, Wednesday, from 5:30-7:00 PM.

Tuesday, December 22, 2015

The Most Important Symbol in Science (it may not be what you think!)

By Jim Schmidt
Sr. Scientific Advisor
ABC Laboratories
www.abclabs.com
Symbols.  We use a LOT of them in doing scientific work.  Every letter in the alphabet from a to z (acceleration to complex variable), and from A to Z (ampere to altitude); for good measure, every letter in the Greek alphabet as well, from alpha to omega (angular acceleration to frequency).


Some perform multiple duties: the Greek letter mu, µ, can represent absorption coefficient, chemical potential, magnetic dipole moment, mean, micro–, muon, permeability, and reduced mass.


And then there are the unique ones such as Å (Angstrom).


As it happens, I actually think the most important symbol used in science is the question mark: ?


It's the launch point from the simplest science fair experiment to the most advanced research:


"I wonder if...?"
"What happens when....?"
"Why does the....?"
"How can we...."?


Indeed, about a decade ago, Science published a special issue devoted to "125 Questions: What Don't We Know?" and it included everything from "What is the Universe Made of?" to "Why do Humans have so few genes?" to "Are We Alone in the Universe?"


Questions are also the foundation of the important and interesting regulatory-driven research we perform on behalf of our customers here at ABC Labs:


"What happens when this product is....?"
"How quickly does this chemical degrade when exposed to...?"
"What is the identity of the unknown component in...?"

In looking ahead to 2016, here are two more:


What product development challenges do you face in the new year? 
What can we do to help?

Tuesday, December 15, 2015

I-SPY and now AGILE Cancer Programs


By Harley Everett Wilcox, MBA
Senior Scientific Advisor
ABC Laboratories
www.abclabs.com

Historical clinical cancer studies lack efficiency and require significant time for often an overall survival improvement of only 60 days versus standard treatment. The inefficiencies may be related to the need for adequate safety evaluation, single agent studies, and limited tumor biological information for individual patients.  Approval of a new oncological agents require 10-15 years of clinical drug development and in rarer cancers, patient populations available for study are lacking .New investigation drugs require evaluation in diseased patients prior to approval and often before combination with other attractive agents. With the advancements in biological test procedures, and better understanding of cancer biology, an individual tumor may be profiled to determine the theoretical optimum drugs, combination of drugs and dosing schedule.

The I-SPY program is a novel personalized cancer treatment study supported by the FDA, NIH and a consortium of pharmaceutical companies via the Foundation for the National Institutes of Health (FNIH). The design allows for investigating new drug therapies with standard treatment and flexibility to modify treatment protocols on the fly, saving time, money, and optimal treatment regimens for breast cancer patients.  Multiple company intellectual property have been combined in a single phase II like program to access the best therapy based on tumor biology and proof concept of activity prior to surgery in resistant tumor types. The goal will be to bring effective treatments to market with fewer patients and in less time.  

Targeting another type of cancer in an adaptive trial approach is MD Anderson and the recently announced AGILE study.  Glioblastoma multiform has yet to see a new chemical treatment option in ~10 years with the standard chemotherapy Tremodar and radiation providing an overall survival improvement of just 2 months.  MD Andersons’ Mitchel Burger, MD states the uniqueness of the study, like the I-SPY uses biological tumor profiling and Bayesian statistics to limit the number of clinical patients.  The statistical method allow for a probability approach to advance drug winners more quickly. As stated earlier, one issue with rare cancers is adequate patient populations for supporting multiple clinical studies. With~10,000 GBM cases a year combined with aggressive disease, brain cancer clinical programs often require longer time to complete enrollment.

These adaptive clinical trial programs will hopefully provide more meaningful outcome for clinical trial participants and more rapid approval for needed treatment options.

References:
Target Oncology (targetdonc.com)

Thursday, December 10, 2015

Teaming up to Develop Life-Enhancing Medicines

ABC provides IND-enabling, registration, and post-commercialization support for the development, quality control, and lifecycle of innovative therapies and generic medicines. Through development know-how, cross-disciplinary technical expertise, and applied experience with evolving global regulatory frameworks, we help efficiently advance and manage programs for large and small molecule drugs, medical devices, and combination products. Better insight. Better outcomes. Ask ABC.

ABC Laboratories: Pharmaceutical Development Expertise



Over our more than two decades’ experience with drug chemistries, ABC has worked with virtually every class and type of compound, across most indications and all common delivery systems. We have contributed data to and drafted sections of IND, NDA and ANDA submissions for dozens of commercial products. And we’ve helped hundreds of companies like yours answer challenging development questions, respond to regulators and uncover sources of problematic manufacturing issues.

Click here for more on ABC's Pharmaceutical Capabilities.